这篇文章发布于2023年10月nature。通讯作者是来自于 DOE Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.
背景介绍&目标
作者首先背景介绍了两种主流宏基因组分析方法,包括reads-based reference mapping(eg…
文章目录 Deep learning at base-resolution reveals cis-regulatory motif syntaxproblemBPNet: predicting base-resolution profiles from DNA sequenceInterpreting the predictions of BPNet1 DeepLIFT2 TF-MoDISCO3 motif syntax derived TF cooperativity Experimental …
生物信息中High-Order高阶关系研究论文集锦(3) 61. Signaling in Host-Associated Microbial Communities62. Spatial structure, cooperation and competition in biofilms63. Specialized Metabolites from the Microbiome in Health and Disease64. Synthetic Ecology of …
文章目录 RNA折叠RNA folding representation1 DP for simple folds1.1 Nussinov Algorithm objective1.2 energy constraints1.3 The key idea of the algorithm 2 DP for stacking and complex foldsStochastic context free grammars 来自Manolis Kellis教授(MIT…
基因融合与癌症研究简历史(截止到2015年)
Major discoveries from research on gene fusions and cancer 主要肿瘤亚型涉及的基因融合数量
Number of gene fusions involved in major neoplasia subtypes 恶性疾病中基因融合相关FDA批准药物
FDA-approved drugs targeting…